Parsing

After solving a system of equations using xds_solve, the outputs are parsed and attached to xds_object$outputs.

Use get_*_orbits to inspect the orbits.

Note: xds_object$outputs are overwritten each time xds_solve is called.

Internals

1. Each module defines a method parse_*_orbits

2. xds_solve calls parse_outputs which calls parse_*_orbits for each component and for each species

3. Outputs are parsed and stored on the xds object as xds_obj$outputs

   • time is stored as xds_obj$outputs$time

   • the full output matrix is stored as xds_obj$outputs$deout

   • the last state of the system is stored as mod$outputs$last_y

   • several dynamical terms (EIR, PR, fqZ, kappa) are computed and attached as orbits

   • the state variables are extracted from the output matrix by name

   • the terms and variables are attached as named lists to xds_obj$outputs$orbits.

     • XH holds parsed outputs for the XH component

     • MY holds parsed outputs for the MY component

     • L holds parsed outputs for the L component