Setup Mosquito Dispersal Matrix

A flexible setup function for mosquito dispersal. The first argument Kname can be either a matrix, the name of a method, or a list of options that includes a method name:

• if Kname is a string of characters, it dispatches the method

• if Kname is a matrix, then a matrix is set up

• if Kname is a list of options, then dispatching is on Kname$name

the method dispatches on class(options)

Options for Kname are:

• is.matrix(Kname): if the user passes a matrix, then class(Kname) <- "as_matrix"

• Kname = "no_setup" – the xds object is returned unmodified

• Kname = "zero" – set up a matrix of all zeros

• Kname = "as_matrix" – calls change_K_matrix and passes K_matrix

• Kname = "herethere" – calls make_K_matrix_herethere

• Kname = "xy" – calls make_K_matrix_xy

Usage

setup_K_matrix(Kname, xds_obj, options = list(), s = 1)

Arguments

Kname

a name, a matrix, or a list

xds_obj

an xds model object

options

a list of options to configure K_matrix

s

the vector species index

Value

an xds object