Construct a function describing the EIR, including
the mean EIR, the seasonal pattern, and the i
For set of paired a time series \(X,\) compute the
phase of a seasonal pattern for the EIR
Usage
reconD_shock_xm(
xds_obj,
do_bednet = TRUE,
bednet_ix = c(),
do_irs = TRUE,
irs_ix = c(),
D = 365,
N = 2
)
Arguments
- xds_obj
an xds xds_obj
- do_bednet
if TRUE then fit bednet shocks
- bednet_ix
indices of events to fit
- do_irs
if TRUE then fit irs shocks
- irs_ix
indices of events to fit
- D
remove spline points less than D days after an event
- N
cycle through fits N times
Value
the ramp.xds model object, fitted to a time series.
The state at the end is saved as xds_obj$history