Make parameters for RMlumpy ODE adult mosquito model

Make parameters for RMlumpy ODE adult mosquito model

make_MYZpar_RMlumpy(
  nPatches,
  MYZopts = list(),
  EIPname,
  calK,
  p = 11/12,
  sigma = 1/8,
  f = 0.3,
  q = 0.95,
  eip = 12,
  nu = 1,
  eggsPerBatch = 60,
  p_mod = "static",
  sigma_mod = "static",
  f_mod = "static",
  q_mod = "static",
  nu_mod = "static"
)

Arguments

nPatches

is the number of patches, an integer

MYZopts

a list of values that overwrites the defaults

EIPname

a string: the class name for the EIP model

calK

a mosquito dispersal matrix of dimensions nPatches by nPatches

p

daily mosquito survival

sigma

emigration rate

f

feeding rate

q

human blood fraction

eip

the maximum number of cohorts in the EIP

nu

oviposition rate, per mosquito

eggsPerBatch

eggs laid per oviposition

p_mod

a name to dispatch F_p

sigma_mod

a name to dispatch F_sigma

f_mod

a name to dispatch F_f

q_mod

a name to dispatch F_q

nu_mod

a name to dispatch F_nu

Value

a list